TeamCity CVS checkout translating ^M

TeamCity seems to be checking out files from CVS and translating ^M to new lines in the process. This translation is problematic in a Lex file, where ^M is being used to represent white space. If I checkout the file manually, then I get a different file. Is there a way to change this behavior in TeamCity?

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To be handled in the corresponding issue posted: TW-19425


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